Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015884588.1_cds_XP_016438887.1_34505
CDS Infomation

[gene=LOC107764802] [db_xref=GeneID:107764802] [protein=MACPF domain-containing protein NSL1-like] [protein_id=XP_016438887.1] [location=join(2736..3008,4795..5033,5842..6046,7044..7127,7219..7402,8025..8191,8847..9536)] [gbkey=CDS]
Sequence

ATGGCGTTTAATCCTAGTAGTAGAATGGACCCGCAAACGGCAGCAGAAAAAGCCGTCTCA
GTGATTGGGTTCGGTTATGATTTGACGAGTGATATCCGGTTGACGGCGTGTAAACCCTGT
CCAAGCGGGTCGGGTTTGATAGAGGTTGATCAGAAGTCGACCAAGGACCTAGTGGTGCCA
GGTGGGGTGGTGGTTTCAAAGGTTTCGACTTCAATCAAGTGCGATAAAGGTGAACGAACT
AGGTTTCGCTCTGATGCTCTCTCTTTTAGTCAGATGTCAGAACAATTGAATCAAGAGTTA
TCTTTGTCTGGTAAGATACCTTCAGGTTTGTTTAATGCGATGTTTGGTCATAAGGGATGC
TGGCAAAAGGATGCAGCTTCGACAAAGCTTCTCGCCTTTGATGGTTGGTTTATTACCTTG
TACAATATTGAGTTAGTGAGATCCCATCTAACACTATCTGAGCAAGTGAAGCAAGACGTG
CCTTCTTCTTGGGATCCTCCTGCGCTTGCAGAGTTCATCGAAAAATATGGTACCCATATT
GTTGTCGGGGTAAAGATGGGAGGCAAGGATGTAATTCACATAAAGCAGCTGCAGAATTCG
ACTTTTCAGCCAATGGAGTTGCAGAAATTAGTTAAGCAATTAGCTGATGAGAAATTTTCA
GAAGACGTAAATGGATGCCAGATGCGAAACTCTGTTAAATCTTCTGAAAAACCAAAGGAT
GAAAAATCCATATTCTCAGATCCTCATCTACCATTTGCAAACTCAATGAGACCATCTATT
ATGTCTCACTCGAAAGCTGATGATCTACTAAGTATTCATATCCGTCGCGGAGGTCTTGAT
TTTGGTCAAAGTCATAGCCAGTGGCTGCCTACTGTATCACAGTCTCCCAATGTCATATCA
ATGTCTTTTGTGCCTATCGCTTCACTTTTGAGTGGTGTAAGGGGCAGTGGATTTCTAAGC
CATGCAATTAATCTTTACCTGCGATATAAACCGCCAATCGAGGAGCTTGAACAATTTTTA
GAATTTCAGTTACCTCGGCAGTGGGCTCCAGCATATAGTGATCTTCCTCTTGGTCATCGT
CACAGGAAACAATCCTCTCCATCTTTGCAGTTTACTTTGTTGGGTCCAAGGCTATACGTA
AACACTATAAAGGTAGACTCTGGAAACAGGCCAGTAACTGGGATTCGGTTATACTTGGAA
GGTAAAAGGAGTGATCACCTGGCTATCCATCTTCAACATTTATCAGCACTTCCTCAAAGT
ATCCAACTAACAGATGATCTTAGCTATGAGCCTGTCGATGAGCCAGTTGAACGAGGATAT
TTTGAACCGGTCAAGTGGAGCATATTTTCACATGTTTGCACTGCTCCTGTTGAATACCGT
GGAACACGAATAGATGACCCTGCTTCTATTGTGACCAAGGCCTGGTTTGAGGTGAAGGTT
ATTGGCATGAAAAAGGTCCTCTTCCTGAGGTTGGGATTCTCGATGGTCGCCTCAGCAAAG
ATCCGTCGGTCAGAGTGGGAGGGGCCCACAAGCACATGTCGAAAATCAGGATTGATGTCA
ATGCTGATCAGCACCCCTTTCAGTACAAAGCTAAATCAACCACAGAAGCCAGCTAAGGTG
GACTTGAATTCCGCGGTTTATCCTGGTGGTCCACCTTCACCGGCAAGGGCGCCAAAGATG
TCGCACTTTGTCGATACAACAGAAATGGTAAGAGGCCCTGAGGAGTCACCTGGCTACTGG
GTGGTAACTGGTGCAAAGCTATGTGTAGAATATGGTAGGATAAGAATGAAAGTGAAGTAC
TCGCTCTTAACCATACTGACAGAGGACTCATTGTTGATATAA

Peptide Sequence

PEP ID

XP_016438887.1
PEP Infomation

PREDICTED: MACPF domain-containing protein NSL1-like [Nicotiana tabacum]
Sequence

MAFNPSSRMDPQTAAEKAVSVIGFGYDLTSDIRLTACKPCPSGSGLIEVDQKSTKDLVVP
GGVVVSKVSTSIKCDKGERTRFRSDALSFSQMSEQLNQELSLSGKIPSGLFNAMFGHKGC
WQKDAASTKLLAFDGWFITLYNIELVRSHLTLSEQVKQDVPSSWDPPALAEFIEKYGTHI
VVGVKMGGKDVIHIKQLQNSTFQPMELQKLVKQLADEKFSEDVNGCQMRNSVKSSEKPKD
EKSIFSDPHLPFANSMRPSIMSHSKADDLLSIHIRRGGLDFGQSHSQWLPTVSQSPNVIS
MSFVPIASLLSGVRGSGFLSHAINLYLRYKPPIEELEQFLEFQLPRQWAPAYSDLPLGHR
HRKQSSPSLQFTLLGPRLYVNTIKVDSGNRPVTGIRLYLEGKRSDHLAIHLQHLSALPQS
IQLTDDLSYEPVDEPVERGYFEPVKWSIFSHVCTAPVEYRGTRIDDPASIVTKAWFEVKV
IGMKKVLFLRLGFSMVASAKIRRSEWEGPTSTCRKSGLMSMLISTPFSTKLNQPQKPAKV
DLNSAVYPGGPPSPARAPKMSHFVDTTEMVRGPEESPGYWVVTGAKLCVEYGRIRMKVKY
SLLTILTEDSLLI

Transcript Sequence

Gene sequence data has not been registered.